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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
4
DNase-seq
2
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
24
DNA binding
7
DNA accessibility
1
3D chromatin structure
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
3
control
Date released
154
May, 2021
134
May, 2022
102
May, 2020
76
February, 2023
59
August, 2017
59
September, 2020
55
June, 2019
47
September, 2018
41
February, 2021
32
October, 2019
13
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
5
May, 2019
5
September, 2017
4
August, 2021
3
October, 2022
2
November, 2020
1
March, 2020
1
March, 2023
1
November, 2018
Available data
31
bam
23
bigWig
21
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
tsv
1
hic
1
tar
Organism
32
Homo sapiens
Biosample type
234
tissue
32
primary cell
26
cell line
6
in vitro differentiated cells
Organ
31
epithelium
21
blood vessel
21
vasculature
21
vein
9
kidney
1
liver
Project
32
AMP
Genome assembly (visualization)
24
hg19
20
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
files.file_type!
tsv
BIOSAMPLE
ASSAY
32 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
17
2
1
1
epithelial cell of proximal tubule
7
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
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