Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
total RNA-seq
52
ATAC-seq
33
ChIP-seq
Assay category
188
Transcription
52
DNA accessibility
33
DNA binding
Target of assay
33
histone
33
histone modification
28
narrow histone mark
5
broad histone mark
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
273
bigWig
272
bam
188
tsv
39
bed narrowPeak
33
tagAlign
13
fastq
6
bigBed narrowPeak
4
bed broadPeak
Organism
273
Homo sapiens
Biosample type
183
tissue
90
primary cell
Organ
170
liver
6
brain
5
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
228
AMP
45
T1D
Genome assembly (visualization)
273
hg19
221
GRCh38
Lab
227
AMP-T2D consortium
45
Kyle Gaulton, UCSD
1
Stephen Parker, UMich
Audit category:
8
inconsistent ontology term
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
273 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
tissue
liver
143
27
brain
6
body of pancreas
4
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
primary cell
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
T follicular helper cell
2
2
T-helper 1 cell
2
2
T-helper 17 cell
2
2
+ See 20 more…
See all biosamples
Download