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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
7
ATAC-seq
Assay category
106
DNA binding
7
DNA accessibility
Target of assay
42
transcription factor
40
histone
40
histone modification
24
control
23
broad histone mark
17
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
715
February, 2021
399
May, 2021
370
August, 2017
341
May, 2020
336
November, 2017
319
August, 2021
305
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
111
fastq
109
bam
86
bigWig
84
bed narrowPeak
56
bigBed narrowPeak
15
bed bed3+
14
tagAlign
bed broadPeak
Organism
113
Homo sapiens
Biosample type
67
tissue
43
in vitro differentiated cells
3
stem cell
Organ
63
liver
19
epithelium
13
brain
13
embryo
4
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
113
AMP
Genome assembly (visualization)
87
GRCh38
86
hg19
Lab
113
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
11
inconsistent control read length
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
113 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
liver
38
brain
12
right lobe of liver
10
body of pancreas
4
cerebellum (Hemisphere)
1
+ See 2 more…
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
stem cell
hESC
3
See all biosamples
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