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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
15
total RNA-seq
7
ATAC-seq
Assay category
32
DNA binding
15
Transcription
7
DNA accessibility
Target of assay
22
histone
22
histone modification
13
broad histone mark
10
control
9
narrow histone mark
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
56
fastq
54
bam
45
bigWig
28
bed narrowPeak
15
tsv
14
tagAlign
6
bigBed narrowPeak
4
bed broadPeak
Organism
54
Homo sapiens
Biosample type
39
in vitro differentiated cells
15
tissue
Organ
13
embryo
9
brain
4
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
54
AMP
Genome assembly (visualization)
44
GRCh38
43
hg19
Lab
54
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
tissue
brain
8
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
spleen
1
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