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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
46
ChIP-seq
ATAC-seq
Assay category
187
DNA accessibility
46
DNA binding
Target of assay
31
histone
31
histone modification
18
broad histone mark
13
narrow histone mark
11
control
4
RNA binding protein
4
transcription factor
Date released
693
February, 2021
406
August, 2017
406
November, 2017
365
May, 2021
292
October, 2019
243
August, 2021
241
May, 2020
218
June, 2019
168
July, 2018
123
May, 2022
120
May, 2019
102
February, 2023
102
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
December, 2018
35
November, 2019
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
November, 2020
15
October, 2017
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
Available data
226
bam
216
bed narrowPeak
216
bigBed narrowPeak
216
bigWig
190
bed broadPeak
187
bed bed3+
187
bigBed broadPeak
14
tagAlign
9
fastq
Organism
233
Homo sapiens
Biosample type
178
tissue
55
primary cell
Organ
81
kidney
45
brain
43
musculature of body
35
heart
32
limb
20
epithelium
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
233
AMP
Genome assembly (visualization)
216
GRCh38
193
hg19
Lab
233
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
Audit category:
4
missing controlled_by
month_released!
December, 2018
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
233 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
brain
12
15
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
+ See 34 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 17 more…
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