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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
15
total RNA-seq
8
ATAC-seq
Assay category
35
DNA binding
15
Transcription
8
DNA accessibility
Target of assay
24
histone
24
histone modification
15
broad histone mark
11
control
9
narrow histone mark
Date released
715
February, 2021
399
May, 2021
396
November, 2017
372
August, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
93
December, 2017
85
November, 2018
80
April, 2019
76
October, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
41
September, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
52
fastq
51
bam
42
bigWig
25
bed narrowPeak
15
tsv
10
tagAlign
3
bigBed narrowPeak
2
bed broadPeak
Organism
58
Homo sapiens
Biosample type
39
in vitro differentiated cells
19
tissue
Organ
13
embryo
12
brain
5
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
58
AMP
Genome assembly (visualization)
42
GRCh38
41
hg19
Lab
57
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
missing controlled_by
Audit category:
2
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
58 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
tissue
brain
11
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
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