Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
5
GRO-seq
1
ATAC-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
9
DNA binding
4
Transcription
1
3D chromatin structure
1
DNA accessibility
Target of assay
6
histone
6
histone modification
5
broad histone mark
3
control
1
narrow histone mark
Date released
259
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
135
August, 2017
125
November, 2017
97
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
40
May, 2024
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
9
fastq
8
tagAlign
6
bigWig
3
bam
1
hic
Organism
16
Homo sapiens
Biosample type
10
tissue
4
in vitro differentiated cells
3
stem cell
2
cell line
1
primary cell
Organ
10
brain
1
embryo
Project
15
AMP
4
community
1
ITG
Genome assembly (visualization)
hg19
15
GRCh38
5
hg18
Lab
15
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
Audit category:
1
missing controlled_by
assembly!
hg19
BIOSAMPLE
ASSAY
20 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
GRO-seq
ATAC-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
tissue
brain
9
cerebellum (Hemisphere)
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
SB Ad3.1
1
1
hESC
1
cell line
EndoC-BH1
1
1
primary cell
chondrocytes
1
Download