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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
7
ATAC-seq
3
single cell RNA-seq
Assay category
15
DNA binding
7
DNA accessibility
3
Transcription
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
670
February, 2021
411
August, 2017
406
November, 2017
314
October, 2019
296
May, 2020
218
June, 2019
168
July, 2018
164
May, 2021
151
August, 2021
120
May, 2019
108
July, 2019
103
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
22
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
6
November, 2020
4
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
19
fastq
18
bam
16
bigWig
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
3
bed broadPeak
3
tsv
Organism
25
Homo sapiens
Biosample type
22
tissue
3
primary cell
Organ
16
brain
5
pancreas
1
adipose tissue
1
connective tissue
1
epithelium
1
spleen
Project
25
AMP
Genome assembly (visualization)
16
GRCh38
15
hg19
Lab
25
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
25 results
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Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
tissue
brain
15
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
spleen
1
primary cell
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
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