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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
3
ChIP-seq
1
ATAC-seq
Assay category
188
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
187
June, 2019
70
November, 2017
41
August, 2017
9
November, 2018
9
October, 2019
4
October, 2017
1
March, 2019
1
November, 2020
Available data
233
bam
224
bigWig
222
bed narrowPeak
216
bigBed narrowPeak
191
bed broadPeak
187
bed bed3+
187
bigBed broadPeak
17
fastq
14
tagAlign
Organism
191
Homo sapiens
Biosample type
167
tissue
24
primary cell
Organ
78
kidney
33
brain
33
musculature of body
32
limb
30
heart
18
ureter
14
epithelium
7
vasculature
6
connective tissue
5
blood vessel
5
pancreas
4
eye
2
artery
2
liver
1
adipose tissue
Project
191
AMP
Genome assembly (visualization)
191
GRCh38
168
hg19
Lab
190
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
Audit category:
2
missing controlled_by
BIOSAMPLE
ASSAY
191 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
brain
12
3
kidney
13
muscle of leg
13
+ See 35 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 15 more…
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