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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
160
ChIP-seq
8
ATAC-seq
5
total RNA-seq
Assay category
160
DNA binding
8
DNA accessibility
5
Transcription
Target of assay
111
histone
111
histone modification
72
broad histone mark
39
narrow histone mark
30
control
19
transcription factor
11
RNA binding protein
6
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
165
bam
137
bigWig
130
bed narrowPeak
124
bigBed narrowPeak
47
fastq
14
tagAlign
5
tsv
4
bed broadPeak
Organism
173
Homo sapiens
Biosample type
145
tissue
23
cell line
5
primary cell
Organ
50
blood vessel
50
vasculature
44
brain
21
heart
18
blood
18
bodily fluid
8
spleen
7
limb
7
musculature of body
7
pancreas
5
artery
5
epithelium
5
kidney
5
liver
1
adipose tissue
1
connective tissue
Project
173
AMP
Genome assembly (visualization)
136
GRCh38
136
hg19
Lab
172
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
3
inconsistent ontology term
Audit category:
4
missing controlled_by
month_released!
December, 2018
BIOSAMPLE
ASSAY
173 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
tissue
ascending aorta
16
thoracic aorta
16
brain
15
temporal lobe
15
angular gyrus
13
+ See 11 more…
cell line
GM12878
18
HepG2
5
primary cell
kidney epithelial cell
5
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