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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
15
total RNA-seq
8
ATAC-seq
Assay category
154
DNA binding
15
Transcription
8
DNA accessibility
Target of assay
118
histone
118
histone modification
76
broad histone mark
42
narrow histone mark
32
control
4
RNA binding protein
4
transcription factor
Date released
649
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
317
August, 2021
288
October, 2019
216
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
115
May, 2019
105
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
169
bam
139
bigWig
122
bed narrowPeak
100
bigBed narrowPeak
56
fastq
15
tsv
14
tagAlign
4
bed broadPeak
Organism
177
Homo sapiens
Biosample type
133
tissue
39
in vitro differentiated cells
5
primary cell
Organ
50
blood vessel
50
vasculature
44
brain
21
heart
13
embryo
7
limb
7
musculature of body
7
pancreas
artery
5
epithelium
5
kidney
1
adipose tissue
1
connective tissue
1
spleen
Project
177
AMP
Genome assembly (visualization)
138
GRCh38
138
hg19
Lab
176
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
3
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
2
inconsistent control read length
organ_slims!
artery
BIOSAMPLE
ASSAY
177 results
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ChIP-seq
total RNA-seq
ATAC-seq
tissue
ascending aorta
16
thoracic aorta
16
brain
15
temporal lobe
15
angular gyrus
13
+ See 10 more…
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
primary cell
kidney epithelial cell
5
See all biosamples
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