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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
209
ChIP-seq
8
ATAC-seq
2
total RNA-seq
Assay category
209
DNA binding
8
DNA accessibility
2
Transcription
Target of assay
134
histone
134
histone modification
87
broad histone mark
55
control
47
narrow histone mark
20
transcription factor
16
RNA binding protein
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
211
bam
158
bigWig
154
bed narrowPeak
148
bigBed narrowPeak
77
fastq
14
tagAlign
4
bed broadPeak
2
tsv
Organism
219
Homo sapiens
Biosample type
212
tissue
7
primary cell
Organ
60
pancreas
50
blood vessel
50
vasculature
44
brain
24
adipose tissue
24
connective tissue
21
heart
7
epithelium
7
limb
7
musculature of body
5
artery
5
kidney
1
spleen
Project
219
AMP
Genome assembly (visualization)
157
GRCh38
157
hg19
Lab
218
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
3
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
219 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
tissue
body of pancreas
35
4
ascending aorta
16
endocrine pancreas
16
thoracic aorta
16
brain
15
+ See 14 more…
primary cell
kidney epithelial cell
5
pancreatic acinar cell
2
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