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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
ChIP-seq
4
ATAC-seq
4
total RNA-seq
1
DNase-seq
Assay category
126
DNA binding
5
DNA accessibility
4
Transcription
Target of assay
97
histone
97
histone modification
64
broad histone mark
33
narrow histone mark
24
control
5
RNA binding protein
5
transcription factor
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
197
August, 2017
171
June, 2019
149
February, 2023
111
May, 2019
94
December, 2017
94
May, 2022
92
July, 2019
81
November, 2018
80
April, 2019
47
September, 2023
45
March, 2020
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2018
22
February, 2020
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2021
7
January, 2018
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
128
bam
104
bigWig
100
bed narrowPeak
97
bigBed narrowPeak
14
tagAlign
12
fastq
4
bed broadPeak
4
tsv
1
bed bed3+
1
bigBed broadPeak
Organism
135
Homo sapiens
Biosample type
124
tissue
11
primary cell
Organ
50
blood vessel
50
vasculature
44
brain
21
heart
pancreas
11
epithelium
7
connective tissue
7
limb
musculature of body
5
artery
5
kidney
1
adipose tissue
1
spleen
Project
135
AMP
Genome assembly (visualization)
105
GRCh38
104
hg19
Lab
135
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
4
missing controlled_by
organ_slims!
musculature of body
pancreas
BIOSAMPLE
ASSAY
135 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
DNase-seq
tissue
ascending aorta
16
thoracic aorta
16
brain
15
temporal lobe
15
angular gyrus
13
+ See 8 more…
primary cell
osteoblast
1
4
1
kidney epithelial cell
5
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