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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
108
ATAC-seq
65
ChIP-seq
1
pCHi-C
Assay category
Transcription
108
DNA accessibility
65
DNA binding
Target of assay
39
histone
39
histone modification
29
narrow histone mark
26
control
10
broad histone mark
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
49
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
110
bam
86
bigWig
64
tagAlign
39
bed narrowPeak
17
fastq
6
bigBed narrowPeak
4
bed broadPeak
1
tsv
Organism
174
Homo sapiens
Biosample type
100
primary cell
73
tissue
1
cell line
Organ
51
liver
16
brain
5
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
174
AMP
Genome assembly (visualization)
85
hg19
33
GRCh38
Lab
173
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
Audit category:
4
missing controlled_by
assay_slims!
Transcription
BIOSAMPLE
ASSAY
174 results
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Clear Filters
ATAC-seq
ChIP-seq
pCHi-C
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 23 more…
tissue
liver
50
brain
15
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
+ See 2 more…
cell line
HepG2
1
See all biosamples
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