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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
7
WGBS
2
ATAC-seq
1
single cell RNA-seq
Assay category
16
DNA binding
7
DNA methylation
2
DNA accessibility
1
Transcription
Target of assay
9
control
6
histone
6
histone modification
5
broad histone mark
1
narrow histone mark
1
recombinant protein
1
transcription factor
Date released
692
February, 2021
314
May, 2020
269
August, 2017
266
May, 2021
213
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
125
October, 2019
101
July, 2019
November, 2017
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
105
fastq
102
bam
94
bigWig
bed narrowPeak
79
bigBed narrowPeak
14
tagAlign
13
bed broadPeak
9
bed bed3+
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
26
Homo sapiens
Biosample type
20
tissue
5
cell line
1
primary cell
Organ
10
brain
5
pancreas
5
spleen
3
blood
3
bodily fluid
2
liver
Project
26
AMP
Genome assembly (visualization)
9
GRCh38
1
hg19
Lab
25
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
2
missing controlled_by
month_released!
November, 2017
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
26 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
single cell RNA-seq
tissue
brain
9
spleen
3
2
body of pancreas
2
pancreas
2
cerebellum (Hemisphere)
1
+ See 1 more…
cell line
GM12878
3
HepG2
1
1
primary cell
pancreatic cell
1
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