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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
34
DNA accessibility
DNA binding
20
Transcription
2
3D chromatin structure
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
53
bam
32
bed narrowPeak
28
bigWig
20
tsv
8
fastq
2
bedpe bed3+
2
hic
1
bed broadPeak
Organism
56
Homo sapiens
Biosample type
48
tissue
5
in vitro differentiated cells
3
cell line
Organ
47
pancreas
3
epithelium
2
adipose tissue
2
connective tissue
1
brain
1
spleen
Project
56
AMP
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
55
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
9
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
56 results
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Clear Filters
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
20
19
1
body of pancreas
4
adipose tissue(adipose white tissue)
1
cerebellum (Hemisphere)
1
omental fat pad
1
+ See 1 more…
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
cell line
EndoC_BH1
1
1
1
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