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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ATAC-seq
28
ChIP-seq
20
total RNA-seq
Assay category
34
DNA accessibility
28
DNA binding
20
Transcription
Target of assay
22
histone
22
histone modification
16
broad histone mark
6
narrow histone mark
5
control
1
RNA binding protein
1
transcription factor
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
317
August, 2021
310
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
November, 2019
59
September, 2020
54
March, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
1
August, 2022
1
October, 2022
Available data
74
bam
49
bed narrowPeak
45
bigWig
20
tsv
17
fastq
14
tagAlign
6
bigBed narrowPeak
4
bed broadPeak
2
bedpe bed3+
hic
Organism
82
Homo sapiens
Biosample type
62
tissue
15
cell line
5
in vitro differentiated cells
Organ
58
pancreas
16
brain
15
epithelium
2
adipose tissue
2
connective tissue
1
spleen
Project
82
AMP
Genome assembly (visualization)
71
GRCh38
70
hg19
Lab
81
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
21
inconsistent ontology term
Audit category:
4
missing controlled_by
files.file_type!
hic
BIOSAMPLE
ASSAY
82 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
tissue
islet of Langerhans
20
19
brain
15
body of pancreas
4
adipose tissue(adipose white tissue)
1
cerebellum (Hemisphere)
1
+ See 2 more…
cell line
EndoC_BH1
1
13
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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