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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
ChIP-seq
8
ATAC-seq
Assay category
89
DNA binding
8
DNA accessibility
Transcription
Target of assay
42
histone
42
histone modification
32
control
29
broad histone mark
15
transcription factor
13
narrow histone mark
11
RNA binding protein
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
49
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
89
bam
75
fastq
59
bigWig
57
bed narrowPeak
51
bigBed narrowPeak
14
tagAlign
4
bed broadPeak
Organism
97
Homo sapiens
Biosample type
97
tissue
Organ
56
pancreas
24
adipose tissue
24
connective tissue
16
brain
1
spleen
Project
97
AMP
Genome assembly (visualization)
59
GRCh38
58
hg19
Lab
96
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
missing controlled_by
Audit category:
1
inconsistent control read length
assay_slims!
Transcription
BIOSAMPLE
ASSAY
97 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
body of pancreas
33
4
endocrine pancreas
16
brain
15
omental fat pad
11
1
subcutaneous adipose tissue
12
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