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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
26
total RNA-seq
21
ATAC-seq
1
single cell RNA-seq
Assay category
47
DNA binding
27
Transcription
21
DNA accessibility
Target of assay
44
histone
44
histone modification
27
broad histone mark
17
narrow histone mark
3
control
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
63
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
28
December, 2018
25
February, 2020
23
January, 2019
22
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
89
fastq
86
bam
85
bigWig
57
bed narrowPeak
26
tsv
20
bigBed narrowPeak
14
tagAlign
4
bed broadPeak
1
csv
Organism
95
Homo sapiens
Biosample type
73
primary cell
22
tissue
Organ
77
pancreas
61
epithelium
16
brain
1
adipose tissue
1
connective tissue
spleen
Project
95
AMP
Genome assembly (visualization)
85
GRCh38
84
hg19
Lab
94
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
36
missing controlled_by
organ_slims!
spleen
BIOSAMPLE
ASSAY
95 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 1 more…
tissue
brain
15
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
See all biosamples
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