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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
5
ChIP-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
8
DNA accessibility
5
DNA binding
3
Transcription
Target of assay
12
histone
12
histone modification
broad histone mark
3
control
2
narrow histone mark
Date released
715
February, 2021
356
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
302
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
15
fastq
13
bam
12
bigWig
7
bed narrowPeak
4
tagAlign
3
tsv
2
bed broadPeak
1
bedpe bed3+
1
bigBed narrowPeak
Organism
17
Homo sapiens
Biosample type
13
tissue
3
primary cell
1
in vitro differentiated cells
Organ
8
pancreas
6
brain
3
epithelium
2
adipose tissue
2
connective tissue
1
spleen
Project
17
AMP
Genome assembly (visualization)
12
GRCh38
11
hg19
Lab
16
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
missing controlled_by
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
17 results
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Clear Filters
ATAC-seq
ChIP-seq
single cell RNA-seq
pCHi-C
tissue
brain
5
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
primary cell
pancreatic alpha cell
2
pancreatic acinar cell
1
in vitro differentiated cells
white fat cell
1
See all biosamples
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