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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
Assay category
67
DNA binding
Target of assay
43
histone
43
histone modification
42
transcription factor
25
broad histone mark
24
control
18
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
249
August, 2017
235
October, 2019
159
November, 2017
149
May, 2021
115
May, 2019
74
April, 2019
59
October, 2018
52
December, 2017
50
May, 2020
35
May, 2024
32
August, 2021
32
September, 2018
27
June, 2019
24
February, 2018
15
October, 2017
12
November, 2019
11
January, 2019
6
November, 2018
6
September, 2017
5
November, 2020
4
December, 2018
3
February, 2021
3
July, 2019
3
March, 2020
Available data
61
fastq
60
bam
36
bed narrowPeak
36
bigWig
23
bigBed narrowPeak
15
bed bed3+
14
tagAlign
3
bed broadPeak
Organism
67
Homo sapiens
Biosample type
32
in vitro differentiated cells
32
tissue
3
stem cell
Organ
30
liver
17
epithelium
15
brain
10
embryo
Project
67
AMP
Genome assembly (visualization)
41
GRCh38
41
hg19
Lab
67
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
7
inconsistent control read length
BIOSAMPLE
ASSAY
67 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
hepatocyte
13
pancreatic endoderm
6
Hepatic endoderm
4
Posterior foregut
3
definitive endodermal cell
3
+ See 1 more…
tissue
brain
15
liver
9
right lobe of liver
8
stem cell
hESC
3
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