Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
124
ChIP-seq
100
ATAC-seq
1
pCHi-C
Assay category
Transcription
124
DNA binding
100
DNA accessibility
Target of assay
57
histone
57
histone modification
52
control
38
narrow histone mark
19
broad histone mark
15
transcription factor
11
RNA binding protein
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
49
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
169
bam
117
bigWig
72
bed narrowPeak
58
fastq
50
tagAlign
45
bigBed narrowPeak
1
tsv
Organism
225
Homo sapiens
Biosample type
124
tissue
100
primary cell
1
cell line
Organ
51
liver
51
pancreas
23
adipose tissue
23
connective tissue
Project
225
AMP
Genome assembly (visualization)
117
hg19
64
GRCh38
Lab
225
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent control read length
assay_slims!
Transcription
BIOSAMPLE
ASSAY
225 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
tissue
liver
50
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
+ See 1 more…
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 23 more…
cell line
HepG2
1
See all biosamples
Download