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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
168
ChIP-seq
Assay category
168
DNA binding
2
Transcription
Target of assay
61
histone
61
histone modification
57
transcription factor
50
control
34
broad histone mark
27
narrow histone mark
15
RNA binding protein
3
chromatin remodeller
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
168
bam
152
fastq
117
bed narrowPeak
117
bigWig
95
bigBed narrowPeak
15
bed bed3+
Organism
168
Homo sapiens
Biosample type
122
tissue
43
in vitro differentiated cells
3
stem cell
Organ
63
liver
51
pancreas
23
adipose tissue
23
connective tissue
19
epithelium
13
embryo
Project
168
AMP
Genome assembly (visualization)
122
GRCh38
122
hg19
Lab
168
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
BIOSAMPLE
ASSAY
168 results
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Clear Filters
ChIP-seq
tissue
liver
38
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
+ See 2 more…
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
stem cell
hESC
3
See all biosamples
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