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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ATAC-seq
68
ChIP-seq
2
total RNA-seq
1
pCHi-C
Assay category
100
DNA accessibility
68
DNA binding
2
Transcription
Target of assay
60
control
8
histone
8
histone modification
8
narrow histone mark
Date released
214
August, 2021
200
May, 2022
170
February, 2023
162
August, 2017
147
February, 2021
134
May, 2020
126
November, 2017
123
May, 2021
107
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
113
bam
53
bigWig
31
tagAlign
27
fastq
8
bed narrowPeak
1
tsv
Organism
171
Homo sapiens
Biosample type
110
primary cell
60
tissue
1
cell line
Organ
32
liver
21
connective tissue
18
adipose tissue
11
pancreas
2
epithelium
2
heart
2
musculature of body
1
eye
1
kidney
Project
171
AMP
Genome assembly (visualization)
494
hg19
GRCh38
Lab
171
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
171 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
pCHi-C
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 31 more…
tissue
liver
31
subcutaneous adipose tissue
10
body of pancreas
8
omental fat pad
8
endocrine pancreas
2
+ See 1 more…
cell line
HepG2
1
See all biosamples
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