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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
325
ChIP-seq
2
total RNA-seq
Assay category
325
DNA binding
2
Transcription
Target of assay
219
transcription factor
103
histone
103
histone modification
66
recombinant protein
64
broad histone mark
42
RNA binding protein
39
narrow histone mark
13
chromatin remodeller
2
other context
2
other post-translational modification
Date released
568
February, 2021
280
November, 2017
249
August, 2017
210
June, 2019
207
October, 2019
164
July, 2018
162
May, 2020
141
May, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
41
August, 2021
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
May, 2023
Available data
327
bam
326
bigWig
325
bed narrowPeak
325
bigBed narrowPeak
256
fastq
55
bed broadPeak
54
tagAlign
50
bigBed broadPeak
2
tsv
Organism
327
Homo sapiens
Biosample type
217
cell line
102
tissue
8
primary cell
Organ
217
liver
63
brain
42
pancreas
6
epithelium
5
adipose tissue
5
connective tissue
4
vasculature
2
blood vessel
Project
327
AMP
Genome assembly (visualization)
328
hg19
327
GRCh38
Lab
327
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
18
inconsistent control read length
2
inconsistent control run_type
BIOSAMPLE
ASSAY
327 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
217
tissue
body of pancreas
25
layer of hippocampus
16
endocrine pancreas
14
caudate nucleus
12
middle frontal area 46
11
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
pancreatic acinar cell
2
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