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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
320
ChIP-seq
2
total RNA-seq
Assay category
320
DNA binding
2
Transcription
Target of assay
214
transcription factor
103
histone
103
histone modification
66
recombinant protein
64
broad histone mark
39
narrow histone mark
37
RNA binding protein
13
chromatin remodeller
2
other context
2
other post-translational modification
Date released
280
November, 2017
276
May, 2021
233
August, 2017
209
June, 2019
207
May, 2020
207
October, 2019
182
February, 2021
164
July, 2018
105
August, 2021
96
May, 2019
78
November, 2018
77
December, 2017
72
September, 2018
67
July, 2019
64
April, 2019
56
November, 2019
49
April, 2018
42
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
13
October, 2017
11
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
322
bam
321
bigWig
320
bed narrowPeak
320
bigBed narrowPeak
251
fastq
55
bed broadPeak
54
tagAlign
50
bigBed broadPeak
2
tsv
Organism
322
Homo sapiens
Biosample type
217
cell line
97
tissue
8
primary cell
Organ
217
liver
63
brain
42
pancreas
6
epithelium
adipose tissue
5
connective tissue
4
vasculature
2
blood vessel
Project
322
AMP
Genome assembly (visualization)
323
hg19
322
GRCh38
Lab
322
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
18
inconsistent control read length
2
inconsistent control run_type
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
322 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
217
tissue
body of pancreas
25
layer of hippocampus
16
endocrine pancreas
14
caudate nucleus
12
middle frontal area 46
11
+ See 4 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
pancreatic acinar cell
2
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