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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
4
ATAC-seq
2
total RNA-seq
1
Hi-C
Assay category
29
DNA binding
4
DNA accessibility
2
Transcription
1
3D chromatin structure
Target of assay
29
control
Date released
715
February, 2021
399
May, 2021
369
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
106
July, 2019
94
November, 2017
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
40
May, 2024
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
77
bam
61
fastq
47
bigWig
45
bed narrowPeak
bigBed narrowPeak
2
tsv
1
bed broadPeak
1
bedpe
1
hic
Organism
36
Homo sapiens
Biosample type
34
tissue
2
primary cell
Organ
18
adipose tissue
18
connective tissue
18
pancreas
2
epithelium
Project
36
AMP
Genome assembly (visualization)
5
hg19
4
GRCh38
Lab
31
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
files.file_type!
bigBed narrowPeak
month_released!
April, 2020
BIOSAMPLE
ASSAY
36 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
subcutaneous adipose tissue
10
body of pancreas
8
omental fat pad
8
islet of Langerhans
4
1
endocrine pancreas
2
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primary cell
pancreatic acinar cell
2
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