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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
47
ChIP-seq
Assay category
187
DNA accessibility
47
DNA binding
Target of assay
33
histone
33
histone modification
17
narrow histone mark
16
broad histone mark
10
control
4
RNA binding protein
4
transcription factor
Date released
670
February, 2021
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
176
May, 2022
129
February, 2023
124
August, 2017
120
May, 2019
118
July, 2018
108
July, 2019
82
November, 2017
80
April, 2019
64
March, 2020
61
November, 2019
47
September, 2023
25
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
16
October, 2018
15
May, 2023
10
December, 2019
6
October, 2017
5
April, 2018
5
March, 2023
4
March, 2019
4
October, 2022
3
January, 2018
1
August, 2022
Available data
294
bam
257
bigWig
255
bed narrowPeak
255
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
fastq
2
tsv
Organism
234
Homo sapiens
Biosample type
179
tissue
55
primary cell
Organ
81
kidney
43
musculature of body
35
heart
32
limb
30
brain
20
epithelium
20
pancreas
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
234
AMP
Genome assembly (visualization)
224
GRCh38
201
hg19
Lab
234
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
234 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
endocrine pancreas
16
kidney
13
muscle of leg
13
+ See 35 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 17 more…
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