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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
16
DNA binding
4
Transcription
2
DNA accessibility
Target of assay
14
histone
14
histone modification
8
broad histone mark
7
control
6
narrow histone mark
5
nucleotide modification
Date released
670
February, 2021
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
176
May, 2022
129
February, 2023
124
August, 2017
120
May, 2019
118
July, 2018
108
July, 2019
82
November, 2017
80
April, 2019
64
March, 2020
61
November, 2019
47
September, 2023
25
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
16
October, 2018
15
May, 2023
10
December, 2019
6
October, 2017
5
April, 2018
5
March, 2023
4
March, 2019
4
October, 2022
3
January, 2018
1
August, 2022
Available data
82
bam
fastq
52
bigWig
47
bed narrowPeak
46
bigBed narrowPeak
6
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
32
Homo sapiens
Biosample type
20
tissue
6
cell line
6
primary cell
Organ
26
pancreas
6
connective tissue
6
epithelium
Project
32
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
22
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
32 results
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Clear Filters
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
DNase-seq
tissue
endocrine pancreas
16
islet of Langerhans
4
cell line
EndoC_BH1
6
primary cell
osteoblast
4
1
1
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