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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
ChIP-seq
26
ATAC-seq
2
Hi-C
Assay category
87
DNA binding
26
DNA accessibility
2
3D chromatin structure
Target of assay
40
histone
40
histone modification
31
control
25
broad histone mark
16
transcription factor
15
narrow histone mark
12
RNA binding protein
Date released
406
November, 2017
322
August, 2017
298
October, 2019
226
May, 2021
218
June, 2019
200
May, 2022
196
August, 2021
189
February, 2023
156
February, 2021
152
May, 2020
120
May, 2019
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
19
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
135
bam
82
bed narrowPeak
78
bigWig
60
fastq
45
bigBed narrowPeak
tsv
2
bedpe bed3+
2
hic
Organism
115
Homo sapiens
Biosample type
95
tissue
15
cell line
5
in vitro differentiated cells
Organ
86
pancreas
24
adipose tissue
24
connective tissue
15
epithelium
Project
115
AMP
Genome assembly (visualization)
84
hg19
82
GRCh38
Lab
115
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
Audit category:
1
inconsistent control read length
files.file_type!
tsv
BIOSAMPLE
ASSAY
115 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
tissue
body of pancreas
33
islet of Langerhans
19
1
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
+ See 2 more…
cell line
EndoC_BH1
13
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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