Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
ChIP-seq
26
ATAC-seq
22
total RNA-seq
Assay category
87
DNA binding
26
DNA accessibility
22
Transcription
Target of assay
40
histone
40
histone modification
31
control
25
broad histone mark
16
transcription factor
15
narrow histone mark
12
RNA binding protein
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
135
bam
82
bed narrowPeak
78
bigWig
60
fastq
45
bigBed narrowPeak
22
tsv
2
bedpe bed3+
2
hic
Organism
135
Homo sapiens
Biosample type
113
tissue
15
cell line
5
in vitro differentiated cells
2
primary cell
Organ
106
pancreas
24
adipose tissue
24
connective tissue
17
epithelium
Project
135
AMP
Genome assembly (visualization)
104
GRCh38
104
hg19
Lab
135
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
135 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
tissue
islet of Langerhans
19
19
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
+ See 2 more…
cell line
EndoC_BH1
13
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
primary cell
pancreatic acinar cell
2
See all biosamples
Download