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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
165
ChIP-seq
13
ATAC-seq
Assay category
165
DNA binding
13
DNA accessibility
Target of assay
146
histone
146
histone modification
83
broad histone mark
63
narrow histone mark
19
transcription factor
11
RNA binding protein
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
353
bam
350
bigWig
178
bed narrowPeak
175
tsv
90
tagAlign
60
fastq
45
bigBed narrowPeak
2
bed bed3+
Organism
178
Homo sapiens
Biosample type
127
primary cell
45
tissue
5
in vitro differentiated cells
1
cell line
Organ
43
pancreas
5
adipose tissue
5
connective tissue
3
epithelium
Project
93
AMP
85
T1D
Genome assembly (visualization)
178
hg19
148
GRCh38
Lab
114
Kyle Gaulton, UCSD
64
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
178 results
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Clear Filters
ChIP-seq
ATAC-seq
primary cell
monocyte
84
13
CD8-positive, alpha-beta T cell
30
tissue
body of pancreas
25
endocrine pancreas
14
omental fat pad
3
subcutaneous adipose tissue
2
pancreas
1
in vitro differentiated cells
cardiomyocytes
3
pancreatic PP cell
2
cell line
EndoC_BH1
1
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