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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
26
ATAC-seq
Assay category
56
DNA binding
26
DNA accessibility
Target of assay
40
histone
40
histone modification
25
broad histone mark
16
transcription factor
15
narrow histone mark
12
RNA binding protein
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
135
bam
82
bed narrowPeak
78
bigWig
60
fastq
45
bigBed narrowPeak
22
tsv
2
bedpe bed3+
2
hic
Organism
82
Homo sapiens
Biosample type
65
tissue
12
cell line
5
in vitro differentiated cells
Organ
71
pancreas
12
epithelium
6
adipose tissue
6
connective tissue
Project
82
AMP
Genome assembly (visualization)
82
GRCh38
82
hg19
Lab
82
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
82 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
body of pancreas
25
islet of Langerhans
19
endocrine pancreas
14
omental fat pad
3
subcutaneous adipose tissue
2
+ See 2 more…
cell line
EndoC_BH1
11
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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