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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
2
FAIRE-seq
Assay category
51
DNA binding
2
DNA accessibility
Target of assay
36
histone
36
histone modification
24
broad histone mark
15
transcription factor
12
narrow histone mark
11
RNA binding protein
Date released
312
November, 2017
210
June, 2019
97
May, 2019
73
November, 2018
70
October, 2019
64
April, 2019
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
173
bam
146
bigWig
77
fastq
67
tsv
64
bed narrowPeak
53
bigBed narrowPeak
23
bed bedMethyl
23
bigBed bedMethyl
14
tagAlign
4
bed bed3+
4
bed broadPeak
4
hdf5
Organism
53
Homo sapiens
Biosample type
53
tissue
Organ
40
pancreas
7
brain
5
adipose tissue
5
connective tissue
1
kidney
Project
53
AMP
Genome assembly (visualization)
53
hg19
51
GRCh38
Lab
53
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
53 results
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ChIP-seq
FAIRE-seq
tissue
body of pancreas
25
endocrine pancreas
14
brain
6
omental fat pad
3
subcutaneous adipose tissue
2
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