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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
40
single cell RNA-seq
18
total RNA-seq
ATAC-seq
Assay category
74
DNA binding
58
Transcription
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
693
February, 2021
406
August, 2017
406
November, 2017
365
May, 2021
292
October, 2019
243
August, 2021
241
May, 2020
218
June, 2019
168
July, 2018
123
May, 2022
120
May, 2019
102
February, 2023
102
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
February, 2020
19
April, 2020
16
January, 2021
15
November, 2020
15
October, 2017
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
Available data
98
fastq
76
bam
47
bigWig
45
bed narrowPeak
45
bigBed narrowPeak
19
zippedFastqFolder
2
tsv
Organism
132
Homo sapiens
Biosample type
74
tissue
58
primary cell
Organ
69
pancreas
23
adipose tissue
23
connective tissue
18
epithelium
Project
76
AMP
56
HPAP
Genome assembly (visualization)
47
GRCh38
47
hg19
Lab
76
AMP-T2D consortium
56
Klaus Kaestner, Upenn
Audit category:
1
inconsistent control read length
month_released!
February, 2020
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
132 results
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Clear Filters
ChIP-seq
single cell RNA-seq
total RNA-seq
tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
pancreas
2
primary cell
Langerhans cell
40
pancreatic alpha cell
15
pancreatic acinar cell
2
pancreatic beta cell
1
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