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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
145
ChIP-seq
91
total RNA-seq
3
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Assay category
145
DNA binding
91
Transcription
5
DNA accessibility
Target of assay
96
histone
96
histone modification
51
broad histone mark
45
narrow histone mark
32
control
17
transcription factor
8
RNA binding protein
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
221
bam
205
fastq
201
bigWig
91
tsv
89
bed narrowPeak
57
bigBed narrowPeak
19
bed bed3+
16
tagAlign
12
bed broadPeak
Organism
234
Homo sapiens
Biosample type
198
tissue
43
primary cell
Organ
241
pancreas
148
connective tissue
80
adipose tissue
54
liver
31
epithelium
26
musculature of body
Project
241
AMP
Genome assembly (visualization)
201
hg19
194
GRCh38
Lab
241
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
9
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
241 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
42
89
1
1
body of pancreas
33
endocrine pancreas
16
pancreas
16
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
2
1
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