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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
547
total RNA-seq
6
WGBS
5
single cell RNA-seq
3
snDrop-seq
Assay category
552
Transcription
6
DNA methylation
Date released
559
February, 2021
189
May, 2020
173
May, 2021
164
July, 2018
123
August, 2021
89
August, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
20
November, 2019
16
February, 2023
16
October, 2019
15
February, 2018
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
648
bam
598
bigWig
561
tsv
105
fastq
89
txt
68
bed narrowPeak
45
bigBed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
561
Homo sapiens
Biosample type
452
tissue
78
cell line
22
in vitro differentiated cells
9
primary cell
Organ
449
connective tissue
386
adipose tissue
58
bone element
52
artery
52
blood vessel
52
heart
52
vasculature
34
epithelium
34
pancreas
8
kidney
Project
555
AMP
6
HPAP
Genome assembly (visualization)
547
GRCh38
547
hg19
Lab
555
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
44
inconsistent ontology term
5
audit script error
BIOSAMPLE
ASSAY
561 results
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total RNA-seq
WGBS
single cell RNA-seq
snDrop-seq
tissue
adipose tissue
381
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
+ See 3 more…
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
26
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
primary cell
pancreatic alpha cell
6
pancreatic acinar cell
2
osteoblast
1
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