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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
105
ChIP-seq
2
total RNA-seq
Assay category
105
DNA binding
Target of assay
49
histone
49
histone modification
37
control
27
broad histone mark
22
narrow histone mark
19
transcription factor
15
RNA binding protein
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
105
bam
68
bed narrowPeak
68
bigBed narrowPeak
68
bigWig
58
fastq
Organism
105
Homo sapiens
Biosample type
74
tissue
31
primary cell
Organ
51
pancreas
35
connective tissue
23
adipose tissue
10
musculature of body
6
epithelium
5
heart
3
eye
3
kidney
Project
105
AMP
Genome assembly (visualization)
68
GRCh38
68
hg19
Lab
105
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
105 results
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ChIP-seq
tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
pancreas
2
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
5
cardiac muscle cell
3
epithelial cell of proximal tubule
3
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