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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
90
ChIP-seq
2
total RNA-seq
Assay category
187
DNA accessibility
90
DNA binding
2
Transcription
Target of assay
49
histone
49
histone modification
37
control
27
broad histone mark
22
narrow histone mark
19
transcription factor
RNA binding protein
Date released
715
February, 2021
403
August, 2017
394
May, 2021
369
November, 2017
341
May, 2020
318
August, 2021
314
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
64
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
279
bam
242
bigWig
240
bed narrowPeak
240
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
49
fastq
2
tsv
Organism
279
Homo sapiens
Biosample type
226
tissue
53
primary cell
Organ
80
kidney
51
pancreas
43
musculature of body
35
connective tissue
34
heart
32
limb
30
brain
20
epithelium
19
adipose tissue
18
ureter
7
vasculature
6
eye
5
blood vessel
2
artery
2
liver
Project
279
AMP
Genome assembly (visualization)
242
GRCh38
219
hg19
Lab
279
AMP-T2D consortium
Audit category:
24
inconsistent ontology term
Audit category:
1
inconsistent control read length
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
279 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
tissue
body of pancreas
2
28
heart
18
muscle of arm
17
endocrine pancreas
16
kidney
13
+ See 36 more…
primary cell
skeletal muscle satellite cell
8
cardiac fibroblast
3
4
mesenchymal stem cell
7
cardiac muscle cell
1
2
epithelial cell of proximal tubule
1
2
+ See 18 more…
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