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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
4
ATAC-seq
2
total RNA-seq
1
Hi-C
Assay category
44
DNA binding
4
DNA accessibility
2
Transcription
1
3D chromatin structure
Target of assay
30
histone
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
715
February, 2021
318
November, 2017
314
May, 2020
299
August, 2021
259
May, 2021
212
August, 2017
205
February, 2023
200
May, 2022
199
June, 2019
168
July, 2018
118
October, 2019
108
July, 2019
88
November, 2018
63
December, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
47
bam
45
fastq
17
bigWig
15
bed narrowPeak
15
bigBed narrowPeak
2
tsv
1
bed broadPeak
1
bedpe
1
hic
Organism
51
Homo sapiens
Biosample type
49
tissue
2
primary cell
Organ
28
pancreas
23
adipose tissue
23
connective tissue
2
epithelium
Project
51
AMP
Genome assembly (visualization)
20
hg19
19
GRCh38
Lab
46
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
51 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
body of pancreas
17
subcutaneous adipose tissue
12
omental fat pad
11
islet of Langerhans
4
1
endocrine pancreas
2
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primary cell
pancreatic acinar cell
2
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