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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
192
total RNA-seq
124
ChIP-seq
1
pCHi-C
Assay category
192
Transcription
124
DNA binding
DNA accessibility
Target of assay
57
histone
57
histone modification
52
control
38
narrow histone mark
19
broad histone mark
15
transcription factor
11
RNA binding protein
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
314
bam
262
bigWig
191
tsv
72
bed narrowPeak
60
fastq
50
tagAlign
45
bigBed narrowPeak
Organism
317
Homo sapiens
Biosample type
267
tissue
49
primary cell
1
cell line
Organ
194
liver
53
pancreas
23
adipose tissue
23
connective tissue
2
epithelium
Project
272
AMP
45
T1D
Genome assembly (visualization)
262
hg19
254
GRCh38
Lab
272
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent control read length
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
317 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
tissue
liver
143
50
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
+ See 1 more…
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 23 more…
cell line
HepG2
1
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