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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
410
ChIP-seq
2
total RNA-seq
Assay category
410
DNA binding
2
Transcription
Target of assay
212
transcription factor
100
control
95
histone
95
histone modification
66
recombinant protein
59
broad histone mark
41
RNA binding protein
36
narrow histone mark
11
chromatin remodeller
1
other context
1
other post-translational modification
Date released
715
February, 2021
399
May, 2021
370
August, 2017
341
May, 2020
336
November, 2017
319
August, 2021
305
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
468
bam
384
fastq
381
bigWig
358
bed narrowPeak
357
bigBed narrowPeak
78
tagAlign
bed broadPeak
64
bigBed broadPeak
3
tar
2
tsv
Organism
412
Homo sapiens
Biosample type
257
cell line
150
tissue
5
primary cell
Organ
257
liver
79
brain
53
pancreas
23
adipose tissue
23
connective tissue
4
epithelium
2
vasculature
1
blood vessel
Project
412
AMP
Genome assembly (visualization)
272
GRCh38
258
hg19
Lab
412
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
9
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
412 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
257
tissue
body of pancreas
33
layer of hippocampus
22
endocrine pancreas
16
caudate nucleus
14
substantia nigra
14
+ See 6 more…
primary cell
pancreatic acinar cell
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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