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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
477
ChIP-seq
2
total RNA-seq
Assay category
477
DNA binding
2
Transcription
Target of assay
258
transcription factor
117
histone
117
histone modification
99
control
69
broad histone mark
66
recombinant protein
48
narrow histone mark
47
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
649
February, 2021
411
August, 2017
403
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
213
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
97
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
465
bam
381
fastq
378
bigWig
356
bed narrowPeak
355
bigBed narrowPeak
78
tagAlign
68
bed broadPeak
62
bigBed broadPeak
3
tar
2
tsv
Organism
479
Homo sapiens
Biosample type
315
cell line
156
tissue
8
primary cell
Organ
315
liver
91
brain
53
pancreas
23
adipose tissue
23
connective tissue
8
epithelium
6
vasculature
blood vessel
Project
479
AMP
Genome assembly (visualization)
325
GRCh38
325
hg19
Lab
479
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
22
inconsistent control read length
4
inconsistent control run_type
month_released!
November, 2019
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
479 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
315
tissue
body of pancreas
33
layer of hippocampus
22
endocrine pancreas
16
caudate nucleus
15
substantia nigra
15
+ See 6 more…
primary cell
astrocyte of the cerebellum
3
choroid plexus epithelial cell
3
pancreatic acinar cell
2
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