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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
465
ChIP-seq
2
total RNA-seq
Assay category
465
DNA binding
2
Transcription
Target of assay
259
transcription factor
118
histone
118
histone modification
100
control
69
broad histone mark
66
recombinant protein
49
narrow histone mark
48
RNA binding protein
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
408
August, 2017
399
May, 2021
391
November, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
91
December, 2017
81
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
453
bam
369
fastq
366
bigWig
343
bed narrowPeak
342
bigBed narrowPeak
78
tagAlign
66
bed broadPeak
60
bigBed broadPeak
3
tar
2
tsv
Organism
467
Homo sapiens
Biosample type
300
cell line
156
tissue
11
primary cell
Organ
300
liver
91
brain
53
pancreas
23
adipose tissue
23
connective tissue
8
epithelium
6
vasculature
3
blood vessel
Project
467
AMP
Genome assembly (visualization)
314
GRCh38
313
hg19
Lab
467
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
16
inconsistent control read length
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
467 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
300
tissue
body of pancreas
33
layer of hippocampus
22
endocrine pancreas
16
caudate nucleus
15
substantia nigra
15
+ See 6 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
pancreatic acinar cell
2
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