Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
133
ChIP-seq
9
DNase-seq
7
WGBS
2
total RNA-seq
1
FAIRE-seq
1
single cell RNA-seq
Assay category
133
DNA binding
10
DNA accessibility
7
DNA methylation
3
Transcription
Target of assay
79
transcription factor
35
control
32
RNA binding protein
30
histone
30
histone modification
19
broad histone mark
16
recombinant protein
narrow histone mark
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
715
February, 2021
368
November, 2017
335
May, 2021
323
August, 2017
314
May, 2020
308
August, 2021
207
June, 2019
205
February, 2023
200
May, 2022
173
October, 2019
168
July, 2018
108
July, 2019
88
November, 2018
86
May, 2019
78
December, 2017
65
October, 2018
61
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
152
bam
143
fastq
116
bigWig
107
bed narrowPeak
107
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
2
tsv
1
csv
Organism
153
Homo sapiens
Biosample type
89
tissue
61
cell line
3
primary cell
Organ
53
liver
49
pancreas
24
adipose tissue
24
connective tissue
15
blood
15
bodily fluid
9
spleen
2
brain
2
epithelium
Project
153
AMP
Genome assembly (visualization)
115
GRCh38
107
hg19
Lab
153
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
153 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
WGBS
total RNA-seq
FAIRE-seq
single cell RNA-seq
tissue
body of pancreas
28
2
2
omental fat pad
11
1
subcutaneous adipose tissue
12
endocrine pancreas
10
spleen
6
1
2
+ See 4 more…
cell line
HepG2
45
1
GM12878
15
primary cell
pancreatic acinar cell
2
pancreatic cell
1
See all biosamples
Download