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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
5
ATAC-seq
2
total RNA-seq
1
Hi-C
Assay category
114
DNA binding
5
DNA accessibility
2
Transcription
1
3D chromatin structure
Target of assay
43
transcription factor
39
control
30
histone
30
histone modification
19
broad histone mark
13
RNA binding protein
11
narrow histone mark
2
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
121
bam
106
fastq
82
bigWig
80
bed narrowPeak
80
bigBed narrowPeak
2
bed bed3+
2
tsv
Organism
122
Homo sapiens
Biosample type
87
tissue
28
cell line
7
primary cell
Organ
64
pancreas
27
blood
27
bodily fluid
23
adipose tissue
23
connective tissue
7
epithelium
7
spleen
1
liver
Project
122
AMP
Genome assembly (visualization)
84
GRCh38
84
hg19
Lab
122
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
122 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
spleen
7
+ See 2 more…
cell line
GM12878
27
HepG2
1
primary cell
pancreatic acinar cell
1
2
pancreatic alpha cell
2
pancreatic beta cell
2
See all biosamples
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