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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
40
single cell RNA-seq
18
total RNA-seq
3
ATAC-seq
Assay category
63
DNA binding
58
Transcription
3
DNA accessibility
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
narrow histone mark
Date released
715
February, 2021
368
November, 2017
335
May, 2021
323
August, 2017
314
May, 2020
308
August, 2021
207
June, 2019
205
February, 2023
200
May, 2022
173
October, 2019
168
July, 2018
108
July, 2019
88
November, 2018
86
May, 2019
78
December, 2017
65
October, 2018
61
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
96
fastq
65
bam
39
bigWig
34
bed narrowPeak
34
bigBed narrowPeak
19
zippedFastqFolder
2
tsv
Organism
124
Homo sapiens
Biosample type
63
tissue
61
primary cell
Organ
61
pancreas
23
adipose tissue
23
connective tissue
21
epithelium
Project
65
AMP
59
HPAP
Genome assembly (visualization)
39
GRCh38
36
hg19
Lab
65
AMP-T2D consortium
59
Klaus Kaestner, Upenn
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
124 results
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Clear Filters
ChIP-seq
single cell RNA-seq
total RNA-seq
ATAC-seq
tissue
body of pancreas
28
subcutaneous adipose tissue
12
omental fat pad
11
endocrine pancreas
10
pancreas
2
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic acinar cell
2
pancreatic beta cell
1
1
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