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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ChIP-seq
Assay category
79
DNA binding
Target of assay
79
transcription factor
35
control
32
RNA binding protein
30
histone
30
histone modification
19
broad histone mark
16
recombinant protein
11
narrow histone mark
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
4
June, 2019
1
November, 2019
Available data
79
bam
79
fastq
78
bed narrowPeak
78
bigBed narrowPeak
78
bigWig
Organism
79
Homo sapiens
Biosample type
57
cell line
22
tissue
Organ
49
liver
12
blood
12
bodily fluid
10
pancreas
5
adipose tissue
5
connective tissue
3
spleen
Project
79
AMP
Genome assembly (visualization)
78
GRCh38
76
hg19
Lab
79
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
79 results
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ChIP-seq
cell line
HepG2
45
GM12878
12
tissue
body of pancreas
9
liver
4
omental fat pad
3
spleen
3
subcutaneous adipose tissue
2
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