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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 242ChIP-seq
  • 30total RNA-seq
  • 22ATAC-seq
  • 10DNase-seq
  • 5Hi-C
  • 4pCHi-C
  • 1FAIRE-seq
Assay category
  • 242DNA binding
  • 33DNA accessibility
  • 30Transcription
  • 53D chromatin structure
Target of assay
  • 196histone
  • 196histone modification
  • 141narrow histone mark
  • 55broad histone mark
  • 39control
  • 7recombinant protein
  • 7transcription factor
Date released
  • 715February, 2021
  • 411August, 2017
  • 406November, 2017
  • 399May, 2021
  • 341May, 2020
  • 319August, 2021
  • 314October, 2019
  • 218June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 64March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 250bam
  • 207bigWig
  • 189bed narrowPeak
  • 70bigBed narrowPeak
  • 49tagAlign
  • 16tsv
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 8bed bed3+
  • 4hic
  • 3bedpe bed3+
  • 1hdf5
  • 1tagAlign bed3+
  • 1tar
Organism
  • 314Homo sapiens
Biosample type
  • 242tissue
  • 34primary cell
  • 30cell line
  • 8in vitro differentiated cells
Organ
  • 86brain
  • 69limb
  • 47blood vessel
  • 47vasculature
  • 42nerve
  • 35epithelium
  • 30kidney
  • 26artery
  • 21eye
  • 21vein
  • 18pancreas
  • 8heart
  • 7liver
  • 4connective tissue
  • 4gonad
  • 4ovary
  • 2pituitary gland
  • 1adipose tissue
  • 1lymph node
  • 1skin of body
Project
  • 314AMP
Genome assembly (visualization)
  • 217hg19
  • 207GRCh38
Lab
  • 314AMP-T2D consortium
Audit category:
  • 23inconsistent ontology term
  • 1audit script error
Audit category:
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

314 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
pCHi-C
FAIRE-seq
tissue
islet of Langerhans2114134
tibial nerve35412
tibial artery2312
heart521
brain51
primary cell
endothelial cell of umbilical vein17211
epithelial cell of proximal tubule7
kidney glomerular epithelial cell11
kidney tubule cell11
Heart fetal (cardiac muscle cell)1
cell line
Panc11311
RCC 7860 HIF1a re-expression41
RCC 7860 HIF2a over-expression31
RCC 7860 vector31
glomerular visceral epithelial cell11
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)111
cardiomyocytes (cardiac muscle cell)111
adipocyte2
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