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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
ATAC-seq
10
DNase-seq
2
snATAC-seq
1
FAIRE-seq
Assay category
242
DNA binding
138
DNA accessibility
124
Transcription
5
3D chromatin structure
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
80
bed narrowPeak
17
bigWig
15
bam
12
bigBed narrowPeak
12
tsv
11
bed bed3+
10
bed bed3
7
bed broadPeak
7
bigBed broadPeak
3
bed bedgraph
3
txt
1
tar
Organism
138
Homo sapiens
Biosample type
101
tissue
19
primary cell
16
in vitro differentiated cells
2
cell line
Organ
41
blood vessel
41
vasculature
38
artery
35
heart
28
eye
19
epithelium
17
pancreas
13
connective tissue
6
limb
4
bone element
4
skeleton
3
kidney
3
nerve
3
vein
2
adipose tissue
2
brain
1
liver
1
pituitary gland
1
skin of body
Project
125
AMP
13
T1D
Genome assembly (visualization)
63
hg19
49
GRCh38
Lab
122
AMP-T2D consortium
13
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
13
inconsistent ontology term
BIOSAMPLE
ASSAY
138 results
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Clear Filters
ATAC-seq
DNase-seq
snATAC-seq
FAIRE-seq
tissue
coronary artery
35
islet of Langerhans
24
2
retina
15
pigmented layer of retina
12
tibial artery
1
2
+ See 7 more…
primary cell
endothelial cell of umbilical vein
2
1
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
+ See 4 more…
in vitro differentiated cells
chondrocyte
5
adipocyte
3
immature adipocyte
2
Progenitor cell of Hypothalamus (neural progenitor cell)
1
cardiac precursors (cardiac muscle cell)
1
+ See 4 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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